PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_009622368.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; lamiids; Solanales; Solanaceae; Nicotianoideae; Nicotianeae; Nicotiana
Family NAC
Protein Properties Length: 392aa    MW: 43816.8 Da    PI: 5.8569
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_009622368.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1011.6e-31551971128
             NAM   1 lppGfrFhPtdeelvveyLkkkvegkk...lel.eevikevd....iykvePwdLpkkvkaeekewyfFskrdkkyatgkrknra........tk 79 
                     lp+G++F+P+d el+ eyL++k+   +   +++ +e+i+++d    i++++P++Lp  +k++ ++++fF +  ++yatgkrk+r+         +
  XP_009622368.1  55 LPVGVKFDPSDVELL-EYLEEKCGVGNskqHKFiDEFIPTLDiyegICYTHPENLP-GAKKDGSSIHFFYRITNAYATGKRKRRKisdennlrKE 147
                     799************.******877663343331335777775555889*******.556778899******************86888887766 PP

             NAM  80 sgyWkatgkdkevlskkgelvglkktLvfy..kgrapkgektdWvmheyrl 128
                     + +W++tgk+k v++ +g ++g+kk++v+y  +++  k ekt+Wvmh+y+l
  XP_009622368.1 148 HVRWHKTGKTKVVME-NGLQKGCKKVMVLYqtTKKGLKQEKTHWVMHQYHL 197
                     999**********99.999***********4434666889*********98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.96E-3640216IPR003441NAC domain
PROSITE profilePS5100529.28355216IPR003441NAC domain
PfamPF023654.5E-1456197IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 392 aa     Download sequence    Send to blast
MGRSWLIDGR GLARKIKNAS APTAHQIKDC GAKRQCPNCH YCIDNNDVSQ EWPGLPVGVK  60
FDPSDVELLE YLEEKCGVGN SKQHKFIDEF IPTLDIYEGI CYTHPENLPG AKKDGSSIHF  120
FYRITNAYAT GKRKRRKISD ENNLRKEHVR WHKTGKTKVV MENGLQKGCK KVMVLYQTTK  180
KGLKQEKTHW VMHQYHLGTD EDEKEGEYVV SKIFYQQQKQ SVKANDSHVN EETSGGANQA  240
GPTTPKTVTP NPPRAGVTLS CDNFVDDSLP FSPDQEVEVA KEPGQSSDAK VKSEMEYHTC  300
LAGESQGADA NNVDNSLLCD ELLASYLDSF EHNIGSSTDY AHNTCHLPQG NANTTCGISE  360
LDNLELDTPP DFQLADLPFG SQESIFSWLD RQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1131136KRKRRK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC2153731e-162AC215373.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02HBa0064B17, complete sequence.
GenBankAC2154531e-162AC215453.2 Solanum lycopersicum cultivar Heinz 1706 chromosome 2 clone C02SLe0034H10, complete sequence.
GenBankHG9755141e-162HG975514.1 Solanum lycopersicum chromosome ch02, complete genome.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009622368.10.0PREDICTED: NAC domain-containing protein 8-like
RefseqXP_016476680.10.0PREDICTED: NAC domain-containing protein 8-like
SwissprotQ6NQK22e-87NAC8_ARATH; NAC domain-containing protein 8
TrEMBLM1AY510.0M1AY51_SOLTU; Uncharacterized protein
STRINGPGSC0003DMT4000328290.0(Solanum tuberosum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA81752229
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G01600.12e-95NAC domain containing protein 44